STRINGSTRING
Solyc11g066780.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g066780.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g066780.1.1Uncharacterized protein (1667 aa)    
Predicted Functional Partners:
Solyc06g054560.2.1
Uncharacterized protein (1061 aa)
     
 
  0.686
Solyc02g085390.2.1
Uncharacterized protein (811 aa)
     
 
  0.686
Solyc02g062780.2.1
Uncharacterized protein (771 aa)
     
 
  0.686
Solyc01g090650.1.1
Uncharacterized protein (613 aa)
     
 
  0.686
Solyc01g090640.2.1
Uncharacterized protein (206 aa)
     
 
  0.686
Solyc01g067390.2.1
Uncharacterized protein (1065 aa)
     
 
  0.686
Solyc06g075080.2.1
Uncharacterized protein (458 aa)
       
      0.624
Solyc04g049120.2.1
Uncharacterized protein (1580 aa)
     
      0.565
Solyc11g020290.1.1
Uncharacterized protein (139 aa)
       
 
  0.467
Solyc07g039330.2.1
Uncharacterized protein (377 aa)
       
 
  0.467
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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