STRINGSTRING
Solyc11g066790.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g066790.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g066790.1.1Uncharacterized protein (1071 aa)    
Predicted Functional Partners:
Solyc01g034150.2.1
Uncharacterized protein (713 aa)
     
 
  0.947
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
       
 
  0.944
Solyc02g091120.2.1
DNA ligase (1473 aa)
     
 
  0.935
Solyc03g093860.1.1
Uncharacterized protein (437 aa)
     
 
  0.913
Solyc03g093850.1.1
Uncharacterized protein (609 aa)
     
 
  0.913
Solyc09g009340.1.1
Uncharacterized protein (731 aa)
     
 
  0.861
Solyc11g020760.1.1
Uncharacterized protein (488 aa)
     
 
  0.796
Solyc01g107510.2.1
DNA repair protein REV1 ; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3’-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents (1045 aa)
     
 
  0.794
Solyc10g079250.1.1
Putative recA protein (395 aa)
     
 
  0.793
Solyc05g055780.2.1
Uncharacterized protein (418 aa)
     
 
  0.791
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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