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101245917 protein (Solanum lycopersicum) - STRING interaction network
"101245917" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101245917Uncharacterized protein; Zinc finger C-x8-C-x5-C-x3-H type family protein (309 aa)    
Predicted Functional Partners:
101266099
annotation not available (607 aa)
     
  0.978
Solyc09g090420.2.1
annotation not available (1105 aa)
     
  0.978
101251944
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA (558 aa)
     
  0.978
101263485
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA (560 aa)
     
  0.978
101268341
annotation not available (154 aa)
     
 
  0.899
101246377
annotation not available (109 aa)
     
 
  0.866
101257100
MAK16 protein-related; Belongs to the MAK16 family (302 aa)
     
   
  0.864
101255621
Hydroxyproline-rich glycoprotein family protein (345 aa)
     
 
  0.852
101256810
Uncharacterized protein; RNA-binding (RRM/RBD/RNP motifs) family protein (355 aa)
     
 
  0.839
Solyc02g085420.2.1
U1 small nuclear ribonucleoprotein-70K (478 aa)
     
 
  0.839
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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