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101254562 protein (Solanum lycopersicum) - STRING interaction network
"101254562" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101254562Uncharacterized protein; NAD(P)-linked oxidoreductase superfamily protein (398 aa)    
Predicted Functional Partners:
Solyc08g079110.2.1
Pentapeptide repeat-containing protein (264 aa)
     
   
  0.957
101253094
Uncharacterized protein; Chloroplast RNA binding (379 aa)
     
   
  0.933
Solyc01g006130.2.1
Uncharacterized protein; DnaJ/Hsp40 cysteine-rich domain superfamily protein (228 aa)
     
   
  0.899
101251229
Probable alanine--tRNA ligase, chloroplastic; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family (987 aa)
   
        0.889
101254882
Uncharacterized protein; ATP synthase delta-subunit gene (250 aa)
     
        0.882
101248056
Uncharacterized protein; RNA binding (365 aa)
     
        0.882
101254513
Protein containing PDZ domain, a K-box domain, and a TPR region (330 aa)
     
        0.882
101260492
Uncharacterized protein; Shikimate kinase like 1 (250 aa)
   
        0.881
101249471
Uncharacterized protein; threonyl-tRNA synthetase, putative / threonine--tRNA ligase, putative (673 aa)
   
        0.880
Solyc06g019200.2.1
Uncharacterized protein; Ethylene-dependent gravitropism-deficient and yellow-green-like 2 (468 aa)
   
        0.879
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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