STRINGSTRING
Solyc11g067280.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g067280.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g067280.1.1annotation not available (294 aa)    
Predicted Functional Partners:
Solyc11g072060.1.1
annotation not available (540 aa)
           
  0.646
100037512
Uncharacterized protein; GAMYB-like2 (504 aa)
           
  0.646
100037511
Uncharacterized protein; GAMyb-like1 (537 aa)
           
  0.646
Solyc08g005440.2.1
Uncharacterized protein; NB-ARC domain-containing disease resistance protein; Belongs to the disease resistance NB-LRR family (931 aa)
           
  0.606
101254355
annotation not available (671 aa)
           
  0.549
101263950
annotation not available (689 aa)
           
  0.549
101262068
annotation not available (144 aa)
           
  0.548
RPS17
40S ribosomal protein S17 ; Belongs to the eukaryotic ribosomal protein eS17 family (144 aa)
           
  0.548
HY5
Transcription factor HY5; Transcription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light- induced genes (158 aa)
           
  0.512
101245219
Uncharacterized protein; Domain of unknown function (DUF3598) (409 aa)
           
  0.502
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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