• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g068470.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g068470.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g068470.1.1annotation not available (477 aa)    
Predicted Functional Partners:
101254812
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- biological_process unknown; LOCATED IN- cellular_component unknown; EXPRESSED IN- 24 plant structures; EXPRESSED DURING- 15 growth stages; CONTAINS InterPro DOMAIN/s- COG4 transport (InterPro-IP /.../7), Pentatricopeptide repeat (InterPro-IPR002885); BEST Arabidopsis thaliana protein match is- Pentatricopeptide repeat (PPR) superfamily protein (TAIR-AT5G46100.1); Has 26268 Blast hits to 8959 proteins in 289 species- Archae - 0; Bacteria - 3; Metazoa - 247; Fungi - 222; Plants - 25350; Viruses - 0; Other Euk [...] (736 aa)
 
 
        0.451
LOC543595
DnaJ-like protein (419 aa)
           
  0.428
Solyc05g018610.1.1
annotation not available (197 aa)
           
  0.428
DNAJ
DNAJ-like protein (155 aa)
           
  0.428
101252869
annotation not available (418 aa)
           
  0.428
101253661
annotation not available (154 aa)
           
  0.428
101267064
Chaperone DnaJ-domain superfamily protein (164 aa)
           
  0.428
101262659
Uncharacterized protein; Gametophytic factor 2 (443 aa)
           
  0.428
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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