STRINGSTRING
Solyc11g068730.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g068730.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g068730.1.1Uncharacterized protein (351 aa)    
Predicted Functional Partners:
Solyc10g012370.2.1
Cysteine synthase (351 aa)
       
  0.902
Solyc01g094790.2.1
Cysteine synthase (357 aa)
       
  0.902
Solyc12g008640.1.1
Uncharacterized protein (630 aa)
       
  0.900
Solyc05g051780.2.1
Uncharacterized protein (581 aa)
       
  0.900
GAD2
Glutamate decarboxylase isoform2 (503 aa)
     
 
  0.804
SlGAD4
Glutamate decarboxylase-like (497 aa)
     
 
  0.804
Solyc04g025530.2.1
Glutamate decarboxylase (493 aa)
     
 
  0.804
LOC544313
Glutamate decarboxylase ; Catalyzes the production of GABA. The calmodulin-binding is calcium-dependent and it is proposed that this may, directly or indirectly, form a calcium regulated control of GABA biosynthesis (By similarity) (502 aa)
     
 
  0.804
GAD3
Glutamate decarboxylase isoform3 (484 aa)
     
 
  0.804
Solyc07g065590.2.1
Nicotinate-nucleotide adenylyltransferase (251 aa)
       
  0.631
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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