STRINGSTRING
Rx4 protein (Solanum lycopersicum) - STRING interaction network
"Rx4" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rx4Uncharacterized protein; Belongs to the disease resistance NB-LRR family (894 aa)    
Predicted Functional Partners:
Solyc11g051200.1.1
annotation not available (182 aa)
           
  0.487
Solyc00g009760.2.1
annotation not available (148 aa)
           
  0.487
101252447
annotation not available (771 aa)
           
  0.429
101263667
annotation not available (1169 aa)
       
 
  0.417
101266500
annotation not available (332 aa)
           
  0.416
101259340
annotation not available (94 aa)
           
  0.412
Solyc00g174330.2.1
annotation not available (83 aa)
           
  0.412
101251303
annotation not available (127 aa)
           
  0.412
Solyc10g079420.1.1
annotation not available (205 aa)
           
  0.410
101244669
annotation not available (715 aa)
           
  0.410
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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