STRINGSTRING
Solyc11g069260.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g069260.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g069260.1.1Uncharacterized protein (260 aa)    
Predicted Functional Partners:
Solyc01g080300.2.1
Uncharacterized protein (385 aa)
 
  0.976
Solyc06g068600.2.1
Uncharacterized protein (185 aa)
   
     
  0.505
Solyc02g044050.1.1
Uncharacterized protein (491 aa)
         
  0.484
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
           
  0.459
Solyc05g014970.2.1
Urea amidohydrolase (834 aa)
         
  0.454
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
         
  0.447
Solyc07g065770.2.1
Uncharacterized protein (226 aa)
   
   
  0.425
Solyc12g013630.1.1
Uncharacterized protein (628 aa)
       
  0.400
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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