STRINGSTRING
TBG5 protein (Solanum lycopersicum) - STRING interaction network
"TBG5" - Beta-galactosidase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TBG5Beta-galactosidase (852 aa)    
Predicted Functional Partners:
Solyc05g054600.2.1
Uncharacterized protein (619 aa)
       
      0.898
Solyc07g008950.2.1
Uncharacterized protein (812 aa)
       
      0.601
Solyc12g099340.1.1
Calmodulin-binding transcription factor SR3L (915 aa)
           
  0.468
Solyc05g015650.2.1
Calmodulin-binding transcription factor SR2L (935 aa)
           
  0.468
Solyc01g105230.2.1
Calmodulin-binding transcription factor SR1L (1040 aa)
           
  0.468
Solyc01g060140.2.1
Calmodulin-binding transcription factor SR3 (667 aa)
           
  0.468
Solyc01g057270.2.1
Calmodulin-binding transcription factor SR4 (957 aa)
           
  0.468
Solyc06g062950.1.1
Uncharacterized protein (776 aa)
           
  0.459
Solyc08g014480.2.1
Uncharacterized protein (1110 aa)
   
   
  0.444
Solyc03g006980.2.1
Uncharacterized protein (486 aa)
 
     
  0.403
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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