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Solyc11g069320.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g069320.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g069320.1.1Uncharacterized protein; Galactose oxidase/kelch repeat superfamily protein (218 aa)    
Predicted Functional Partners:
Solyc01g099970.2.1
F-box family protein (619 aa)
           
  0.763
101256409
annotation not available (172 aa)
           
  0.763
Solyc08g048430.2.1
annotation not available (326 aa)
           
  0.739
Solyc02g070480.2.1
annotation not available (192 aa)
           
  0.739
101252680
annotation not available (768 aa)
           
  0.695
101267560
Protein kinases;ubiquitin-protein ligases (1633 aa)
     
   
  0.582
101268560
Uncharacterized protein; Calcium sensing receptor (392 aa)
           
  0.582
Solyc01g102300.2.1
Uncharacterized protein; Phytochrome interacting factor 3 (715 aa)
           
  0.582
101268298
Early-responsive to dehydration stress protein (ERD4) (723 aa)
           
  0.571
101251208
annotation not available (597 aa)
           
  0.557
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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