STRINGSTRING
Solyc11g069340.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g069340.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g069340.1.1Uncharacterized protein (921 aa)    
Predicted Functional Partners:
Solyc12g056490.1.1
Uncharacterized protein (481 aa)
     
 
  0.912
ccs52A
Protein FIZZY-RELATED 2 (481 aa)
     
 
  0.912
ccs52B
Cell cycle switch 52B (499 aa)
     
 
  0.912
Solyc02g088780.2.1
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (423 aa)
     
        0.831
Solyc01g111030.1.1
Ribosome biogenesis protein WDR12 homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (470 aa)
     
        0.831
Solyc01g065580.2.1
Uncharacterized protein (620 aa)
     
        0.830
Solyc07g042380.2.1
Uncharacterized protein (1248 aa)
     
        0.752
Solyc04g015940.2.1
Uncharacterized protein (1162 aa)
     
        0.752
Solyc10g083600.1.1
Uncharacterized protein (337 aa)
     
        0.736
Solyc01g087670.2.1
Uncharacterized protein (907 aa)
     
        0.735
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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