STRINGSTRING
Solyc11g069780.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g069780.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g069780.1.1Uncharacterized protein (798 aa)    
Predicted Functional Partners:
Solyc05g012650.2.1
Uncharacterized protein (1064 aa)
           
  0.489
Solyc05g012640.2.1
Uncharacterized protein (1062 aa)
           
  0.489
Solyc04g005500.2.1
Uncharacterized protein (1046 aa)
           
  0.489
Solyc06g035790.2.1
Uncharacterized protein (651 aa)
           
  0.459
Solyc03g026120.2.1
Uncharacterized protein (650 aa)
           
  0.459
Solyc01g091690.2.1
Uncharacterized protein (636 aa)
           
  0.459
Solyc08g076690.1.1
Inositol-tetrakisphosphate 1-kinase ; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3 (365 aa)
           
  0.432
Solyc08g005130.1.1
Inositol-tetrakisphosphate 1-kinase ; Kinase that can phosphorylate various inositol polyphosphate such as Ins(3,4,5,6)P4 or Ins(1,3,4)P3 (349 aa)
           
  0.432
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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