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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g069890.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g069890.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g069890.1.1Uncharacterized protein; BEL1-like homeodomain 8 (580 aa)    
Predicted Functional Partners:
101262675
Uncharacterized protein; GRAS family transcription factor; Belongs to the GRAS family (507 aa)
       
 
  0.778
ERF4
Ethylene response factor 4 (201 aa)
       
 
  0.774
FALSIFLORA
FLORICAULA/LEAFY-like protein (429 aa)
           
  0.763
Solyc08g014030.1.1
annotation not available (418 aa)
       
 
  0.689
101264463
annotation not available (555 aa)
           
  0.684
Solyc03g112740.1.1
annotation not available (184 aa)
       
 
  0.635
Solyc10g009360.2.1
annotation not available (261 aa)
           
  0.632
101257011
annotation not available (276 aa)
           
  0.632
VAHOX1
Homeobox (323 aa)
           
  0.617
101267688
annotation not available (206 aa)
       
 
  0.602
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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