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LOC543882 protein (Solanum lycopersicum) - STRING interaction network
"LOC543882" - Putative FtsH protease in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC543882Putative FtsH protease (714 aa)    
Predicted Functional Partners:
Solyc00g042130.1.1
Annotation not available (704 aa)
     
 
  0.936
Solyc00g042140.1.1
Annotation not available (399 aa)
     
  0.728
Solyc02g032970.2.1
Uncharacterized protein (229 aa)
     
 
  0.726
Solyc11g051170.1.1
Uncharacterized protein (91 aa)
     
 
  0.723
Solyc11g039980.1.1
Uncharacterized protein (172 aa)
     
 
  0.723
Solyc10g044540.1.1
Uncharacterized protein (293 aa)
     
 
  0.723
Solyc07g027010.1.1
Uncharacterized protein (72 aa)
     
 
  0.723
Solyc06g072540.1.1
Uncharacterized protein (108 aa)
     
 
  0.723
Solyc04g071300.1.1
Uncharacterized protein (98 aa)
     
 
  0.723
Solyc03g033440.1.1
Uncharacterized protein (109 aa)
     
 
  0.723
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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