STRINGSTRING
Solyc11g071440.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g071440.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g071440.1.1Uncharacterized protein (243 aa)    
Predicted Functional Partners:
Solyc01g017740.1.1
Uncharacterized protein (97 aa)
         
  0.624
Solyc02g076720.2.1
Uncharacterized protein (1459 aa)
     
 
  0.599
Solyc01g107270.2.1
Uncharacterized protein (1333 aa)
     
 
  0.599
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
   
  0.593
Solyc04g072800.2.1
Uncharacterized protein (239 aa)
     
 
  0.571
Solyc04g054820.2.1
Uncharacterized protein (343 aa)
     
 
  0.571
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
     
   
  0.567
Solyc11g006340.1.1
Uncharacterized protein (632 aa)
       
  0.535
Solyc00g042140.1.1
Annotation not available (399 aa)
   
   
  0.532
Solyc12g039010.1.1
Cytochrome c oxidase subunit 2 ; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1 (538 aa)
     
 
  0.529
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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