STRINGSTRING
Solyc11g072010.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g072010.1.1" - Homoserine dehydrogenase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g072010.1.1Homoserine dehydrogenase (375 aa)    
Predicted Functional Partners:
Solyc06g062840.2.1
Uncharacterized protein (522 aa)
   
  0.978
Solyc03g121910.1.1
Uncharacterized protein (519 aa)
   
  0.978
Solyc01g005240.2.1
Uncharacterized protein (565 aa)
  0.971
Solyc04g008760.1.1
Uncharacterized protein (377 aa)
 
  0.966
Solyc11g040390.1.1
Uncharacterized protein (819 aa)
 
0.915
Solyc01g005250.2.1
Uncharacterized protein (381 aa)
   
  0.912
Solyc06g064550.2.1
Uncharacterized protein (919 aa)
 
0.908
Solyc07g006520.2.1
Uncharacterized protein (536 aa)
     
 
  0.858
Solyc10g007390.2.1
Uncharacterized protein (475 aa)
     
 
  0.857
Solyc09g065120.2.1
Uncharacterized protein (576 aa)
     
 
  0.857
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (19%) [HD]