STRINGSTRING
Solyc11g072090.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g072090.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g072090.1.1Uncharacterized protein (461 aa)    
Predicted Functional Partners:
Solyc03g095840.2.1
Uncharacterized protein (344 aa)
     
  0.994
Solyc06g082580.2.1
Uncharacterized protein (303 aa)
     
  0.994
Solyc12g049580.1.1
Uncharacterized protein (409 aa)
     
  0.994
Solyc12g099470.1.1
Uncharacterized protein (464 aa)
     
  0.994
Solyc05g054310.2.1
Uncharacterized protein (477 aa)
     
  0.994
Solyc01g066690.2.1
Uncharacterized protein (503 aa)
     
  0.994
Solyc01g098180.2.1
Uncharacterized protein (732 aa)
     
0.993
Solyc02g089810.2.1
Uncharacterized protein (637 aa)
     
  0.988
Solyc12g038340.1.1
Uncharacterized protein (620 aa)
     
  0.988
Solyc11g005600.1.1
Uncharacterized protein (412 aa)
     
  0.988
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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