STRINGSTRING
Solyc11g072340.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g072340.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g072340.1.1Uncharacterized protein (354 aa)    
Predicted Functional Partners:
Solyc02g090910.2.1
Uncharacterized protein (376 aa)
     
  0.971
Solyc08g069120.2.1
Uncharacterized protein (243 aa)
     
  0.965
Solyc08g006430.2.1
Uncharacterized protein (678 aa)
     
  0.965
cdc5
CDC5-like protein (987 aa)
     
  0.959
Solyc07g039550.2.1
Uncharacterized protein (1190 aa)
     
  0.952
Solyc01g110990.2.1
Uncharacterized protein (1111 aa)
     
  0.952
Solyc05g054920.2.1
Uncharacterized protein (337 aa)
     
0.951
Solyc09g005980.2.1
Uncharacterized protein (315 aa)
     
0.950
Solyc06g071200.2.1
Uncharacterized protein (960 aa)
       
 
  0.942
Solyc11g066650.1.1
Uncharacterized protein (579 aa)
     
 
  0.936
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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