STRINGSTRING
Solyc11g072390.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g072390.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g072390.1.1Uncharacterized protein (652 aa)    
Predicted Functional Partners:
Solyc03g112820.2.1
U3 small nucleolar ribonucleoprotein protein MPP10 ; Involved in nucleolar processing of pre-18S ribosomal RNA (552 aa)
     
  0.998
Solyc09g083080.2.1
Uncharacterized protein (552 aa)
     
  0.988
Solyc05g055880.2.1
Uncharacterized protein (513 aa)
     
  0.988
Solyc12g088290.1.1
Uncharacterized protein (820 aa)
     
  0.983
Solyc04g077680.2.1
Uncharacterized protein (809 aa)
     
  0.983
Solyc04g077740.1.1
Uncharacterized protein (360 aa)
     
  0.982
Solyc05g011990.2.1
Uncharacterized protein (940 aa)
     
 
  0.975
BMS1
Ribosome biogenesis protein BMS1 homolog (1231 aa)
     
 
  0.974
Solyc01g007250.2.1
Uncharacterized protein (293 aa)
     
  0.965
Solyc11g065980.1.1
Uncharacterized protein (271 aa)
     
  0.965
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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