STRINGSTRING
Solyc11g072420.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g072420.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g072420.1.1Uncharacterized protein (914 aa)    
Predicted Functional Partners:
Solyc03g005930.2.1
Uncharacterized protein (221 aa)
           
  0.533
Solyc02g071750.2.1
Uncharacterized protein (195 aa)
           
  0.533
Solyc10g009490.1.1
Uncharacterized protein (1348 aa)
     
   
  0.507
Solyc01g095730.2.1
Uncharacterized protein (1344 aa)
     
   
  0.507
Solyc04g010080.2.1
Uncharacterized protein (729 aa)
           
  0.497
DCL1
Endoribonuclease Dicer homolog 1 (1888 aa)
     
   
  0.491
Solyc03g113140.2.1
Uncharacterized protein (301 aa)
           
  0.483
Solyc07g005030.2.1
Uncharacterized protein (1536 aa)
           
  0.475
Solyc11g072450.1.1
Uncharacterized protein (168 aa)
           
  0.459
Solyc11g008540.1.1
Uncharacterized protein (1352 aa)
     
   
  0.455
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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