• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g072420.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g072420.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g072420.1.1annotation not available (914 aa)    
Predicted Functional Partners:
101264483
annotation not available (195 aa)
           
  0.851
DCL1
Uncharacterized protein; Dicer-like 1; Belongs to the helicase family. Dicer subfamily (1888 aa)
     
   
  0.684
101246022
annotation not available (221 aa)
           
  0.581
DCL
Protein DCL, chloroplastic; Has a function in the early stage of chloroplast development and palisade cell morphogenesis. Required for correct plastid ribosome assembly. Required for processing and maturation of 4.5S rRNA (224 aa)
           
  0.580
101260236
annotation not available (243 aa)
           
  0.556
Solyc11g072430.1.1
annotation not available (247 aa)
 
            0.546
101264590
annotation not available (936 aa)
           
  0.534
Solyc03g110950.1.1
annotation not available (530 aa)
           
  0.525
DCL4
Uncharacterized protein; Dicer-like 4; Belongs to the helicase family. Dicer subfamily (1536 aa)
           
  0.520
Solyc08g005440.2.1
Uncharacterized protein; NB-ARC domain-containing disease resistance protein; Belongs to the disease resistance NB-LRR family (931 aa)
           
  0.499
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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