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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g072800.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g072800.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g072800.1.1annotation not available (816 aa)    
Predicted Functional Partners:
101251031
Uncharacterized protein; Arabidopsis RAC-like 9; Belongs to the small GTPase superfamily. Rho family (208 aa)
       
 
  0.605
101254386
annotation not available (636 aa)
       
 
  0.577
101248535
Leucine-rich repeat (LRR) family protein (415 aa)
       
 
  0.577
Solyc01g087470.2.1
Uncharacterized protein; FKBP-type peptidyl-prolyl cis-trans isomerase family protein (325 aa)
           
  0.574
TCTR2
TCTR2 protein (982 aa)
       
 
  0.555
101266437
Leucine-rich receptor-like protein kinase family protein (990 aa)
       
 
  0.530
Solyc03g007050.2.1
annotation not available (975 aa)
       
 
  0.530
101250851
Uncharacterized protein; Transmembrane kinase 1; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family (937 aa)
       
 
  0.498
101265340
annotation not available (432 aa)
           
  0.433
101265262
Chalcone-flavanone isomerase family protein (412 aa)
           
  0.414
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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