• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc11g073260.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc11g073260.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc11g073260.1.1annotation not available (141 aa)    
Predicted Functional Partners:
101257133
annotation not available (447 aa)
       
 
  0.829
104649437
Histone superfamily protein (144 aa)
     
 
  0.789
101254197
Histone H3 (136 aa)
 
 
 
  0.778
LOC544102
Histone H3 (136 aa)
 
 
 
  0.778
544102
Histone H3 (136 aa)
 
 
 
  0.778
Solyc04g074580.1.1
Histone H3 (136 aa)
 
 
 
  0.778
FIE
Fertilization-independent endosperm protein (372 aa)
       
 
  0.771
101251929
Uncharacterized protein; Haloacid dehalogenase-like hydrolase family protein (1077 aa)
     
 
  0.767
Solyc10g024470.1.1
annotation not available (490 aa)
     
 
  0.731
LHP1
Chromo domain protein LHP1; Structural component of heterochromatin involved in gene repression. Recognizes and binds histone H3 tails methylated at ’Lys-9’, leading to epigenetic repression (399 aa)
     
 
  0.731
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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