STRINGSTRING
Solyc12g005500.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g005500.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g005500.1.1Uncharacterized protein (283 aa)    
Predicted Functional Partners:
Solyc11g013260.1.1
Uncharacterized protein (301 aa)
   
 
0.985
Solyc11g010190.1.1
Uncharacterized protein (279 aa)
   
 
0.985
Solyc05g051510.2.1
Uncharacterized protein (277 aa)
   
 
0.985
Solyc01g098230.2.1
Uncharacterized protein (498 aa)
     
 
  0.817
Solyc12g044400.1.1
Uncharacterized protein (860 aa)
     
 
  0.766
Solyc10g086550.1.1
Uncharacterized protein (813 aa)
     
 
  0.766
Solyc10g086540.1.1
Uncharacterized protein (736 aa)
     
 
  0.766
Solyc09g010950.2.1
Uncharacterized protein (813 aa)
     
 
  0.766
Solyc08g082530.2.1
Uncharacterized protein (956 aa)
     
 
  0.766
Solyc06g005950.2.1
Uncharacterized protein (828 aa)
     
 
  0.766
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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