STRINGSTRING
Solyc12g005760.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g005760.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g005760.1.1Uncharacterized protein (266 aa)    
Predicted Functional Partners:
Solyc11g071260.1.1
Uncharacterized protein (157 aa)
     
 
  0.785
Solyc06g008730.2.1
Uncharacterized protein (929 aa)
           
  0.497
Solyc10g005650.2.1
Uncharacterized protein (744 aa)
           
  0.491
Solyc05g054950.2.1
Peroxin-12 ; Required for peroxisome biogenesis and for PTS1- and PTS2-dependent protein import into peroxisomes (393 aa)
           
  0.489
LOC543864
Peroxisomal targeting signal type 2 receptor (316 aa)
           
  0.489
Solyc06g007700.2.1
Uncharacterized protein (296 aa)
           
  0.489
Solyc06g071470.2.1
Uncharacterized protein (527 aa)
           
  0.480
Solyc04g080930.2.1
Uncharacterized protein (397 aa)
           
  0.459
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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