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Solyc12g005870.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g005870.1.1" - NEDD8-activating enzyme E1 regulatory subunit in Solanum lycopersicum
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
Solyc12g005870.1.1NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric E1 enzyme. E1 activates RUB1/NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a RUB1-ECR1 thioester and free AMP. E1 finally transfers RUB1 to the catalytic cysteine of RCE1 (500 aa)    
Predicted Functional Partners:
101252115
Uncharacterized protein; E1 C-terminal related 1 (448 aa)
     
 
  0.994
101247072
Uncharacterized protein; Ubiquitin (154 aa)
     
 
  0.888
101265536
Uncharacterized protein; Cyclin-dependent kinase-activating kinase assembly factor-related / CDK-activating kinase assembly factor-related (188 aa)
     
   
  0.860
101259616
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation (90 aa)
       
 
  0.803
101243776
annotation not available (183 aa)
       
 
  0.769
Solyc10g039370.1.1
annotation not available (80 aa)
       
 
  0.769
Solyc06g007500.1.1
annotation not available (262 aa)
       
 
  0.769
RCE1
Uncharacterized protein; RUB1 conjugating enzyme ; Belongs to the ubiquitin-conjugating enzyme family (183 aa)
       
 
  0.769
Solyc02g085690.2.1
annotation not available (226 aa)
       
 
  0.769
Solyc06g034160.2.1
Autophagy-related protein 3; Autophagy 3 (APG3) (313 aa)
     
 
  0.767
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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