STRINGSTRING
Solyc12g006090.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g006090.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g006090.1.1Uncharacterized protein (215 aa)    
Predicted Functional Partners:
Solyc11g013000.1.1
Uncharacterized protein (210 aa)
     
  0.980
Solyc10g045640.1.1
Uncharacterized protein (214 aa)
     
  0.980
Solyc06g060450.2.1
Uncharacterized protein (215 aa)
     
  0.980
Solyc06g060440.1.1
Uncharacterized protein (213 aa)
     
  0.980
Solyc06g060430.1.1
Uncharacterized protein (92 aa)
     
  0.980
Solyc05g013130.2.1
Uncharacterized protein (213 aa)
     
  0.980
Solyc04g005570.2.1
Uncharacterized protein (215 aa)
     
  0.980
Solyc01g104220.2.1
Uncharacterized protein (212 aa)
     
  0.980
Solyc01g010940.2.1
Uncharacterized protein (216 aa)
     
  0.980
Solyc03g120900.1.1
Uncharacterized protein (301 aa)
     
  0.742
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (14%) [HD]