STRINGSTRING
Solyc12g006360.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g006360.1.1" - Multidrug and toxic compound extrusion protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g006360.1.1Multidrug and toxic compound extrusion protein (503 aa)    
Predicted Functional Partners:
Solyc12g049300.1.1
Uncharacterized protein (352 aa)
     
   
  0.543
Solyc03g031470.2.1
Uncharacterized protein (334 aa)
   
   
  0.538
Solyc12g057010.1.1
Uncharacterized protein (520 aa)
         
  0.536
Solyc04g055080.2.1
Uncharacterized protein (534 aa)
         
  0.536
Solyc04g082410.2.1
Uncharacterized protein (322 aa)
           
  0.526
AH
Basic helix-loop-helix transcription factor (680 aa)
     
   
  0.523
Solyc04g074320.1.1
Uncharacterized protein (273 aa)
     
   
  0.523
Solyc08g080040.2.1
Uncharacterized protein (418 aa)
     
   
  0.518
Solyc00g304030.1.1
Annotation not available (1080 aa)
   
   
  0.515
LOC544150
Dihydroflavonol-4-reductase (379 aa)
   
   
  0.503
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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