STRINGSTRING
Solyc12g006370.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g006370.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g006370.1.1Uncharacterized protein (488 aa)    
Predicted Functional Partners:
Solyc07g039310.1.1
Uncharacterized protein (513 aa)
   
   
0.928
Solyc05g018880.1.1
Uncharacterized protein (512 aa)
   
   
0.928
Solyc01g087590.2.1
Uncharacterized protein (497 aa)
   
   
0.926
Solyc12g008850.1.1
Uncharacterized protein (672 aa)
         
0.911
Solyc03g005160.2.1
Amine oxidase (658 aa)
         
  0.909
SPM1
Putative spermine synthase (356 aa)
         
  0.906
Solyc03g031880.2.1
Uncharacterized protein (478 aa)
   
   
0.902
Solyc02g081390.2.1
Uncharacterized protein (495 aa)
   
   
0.902
spdsyn
Spermidine synthase (342 aa)
         
  0.901
Solyc04g026030.2.1
Uncharacterized protein (309 aa)
         
  0.901
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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