STRINGSTRING
Solyc12g006670.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g006670.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g006670.1.1Uncharacterized protein (239 aa)    
Predicted Functional Partners:
Solyc07g007380.2.1
Uncharacterized protein (316 aa)
     
  0.977
Solyc02g080380.2.1
Derlin ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (245 aa)
       
  0.962
Solyc10g074810.1.1
Uncharacterized protein (477 aa)
     
  0.898
Solyc06g048520.2.1
Uncharacterized protein (434 aa)
     
  0.898
Solyc03g095450.2.1
Uncharacterized protein (438 aa)
     
  0.898
Solyc06g072790.2.1
Uncharacterized protein (504 aa)
     
  0.895
Solyc06g034330.2.1
Uncharacterized protein (582 aa)
     
  0.895
Solyc03g096930.2.1
Uncharacterized protein (498 aa)
     
  0.895
Solyc01g081120.2.1
Uncharacterized protein (136 aa)
     
  0.895
Solyc08g082970.2.1
Uncharacterized protein (465 aa)
       
 
  0.868
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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