STRINGSTRING
LKT1 protein (Solanum lycopersicum) - STRING interaction network
"LKT1" - Potassium channel in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LKT1Potassium channel (883 aa)    
Predicted Functional Partners:
Solyc02g021440.2.1
Non-specific serine/threonine protein kinase (457 aa)
     
 
  0.850
Solyc12g098150.1.1
Uncharacterized protein (330 aa)
       
  0.707
Solyc01g010080.2.1
Uncharacterized protein (628 aa)
     
 
0.640
Solyc10g024360.1.1
Uncharacterized protein (841 aa)
       
 
0.611
Solyc01g104030.2.1
Inward rectifier potassium channel-like protein (837 aa)
       
 
0.610
CBL10
Calcineurin B-like 10; Calcineurin B-like molecule (257 aa)
       
 
  0.598
Solyc11g067160.1.1
Uncharacterized protein (398 aa)
       
  0.591
Solyc09g098090.2.1
Uncharacterized protein (345 aa)
       
  0.591
Solyc09g098000.2.1
Uncharacterized protein (349 aa)
       
  0.591
Solyc09g097990.1.1
Uncharacterized protein (90 aa)
       
  0.591
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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