STRINGSTRING
Solyc12g006930.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g006930.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g006930.1.1Uncharacterized protein (421 aa)    
Predicted Functional Partners:
Solyc07g049570.2.1
3-oxoacyl-[acyl-carrier-protein] synthase (465 aa)
         
  0.946
Solyc08g082620.2.1
Uncharacterized protein (485 aa)
         
  0.940
Solyc08g016170.2.1
Uncharacterized protein (468 aa)
         
  0.940
Solyc02g070790.2.1
Uncharacterized protein (469 aa)
         
  0.940
Solyc10g078740.1.1
Uncharacterized protein (392 aa)
     
 
  0.935
Solyc01g006450.2.1
Uncharacterized protein (392 aa)
     
 
  0.935
Solyc03g122120.2.1
Uncharacterized protein (558 aa)
         
  0.928
Solyc11g008680.1.1
Acyl-[acyl-carrier-protein] desaturase ; Introduction of a cis double bond between carbons of the acyl chain (393 aa)
         
  0.921
Solyc06g053480.2.1
Acyl-[acyl-carrier-protein] desaturase ; Introduction of a cis double bond between carbons of the acyl chain (397 aa)
         
  0.921
Solyc03g063110.2.1
Acyl-[acyl-carrier-protein] desaturase ; Introduction of a cis double bond between carbons of the acyl chain (393 aa)
         
  0.921
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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