STRINGSTRING
Solyc12g007120.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g007120.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g007120.1.1Uncharacterized protein (303 aa)    
Predicted Functional Partners:
Solyc04g079550.2.1
Uncharacterized protein (373 aa)
   
   
0.814
Solyc01g098780.2.1
Uncharacterized protein (167 aa)
     
  0.729
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
   
   
  0.652
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
   
   
  0.623
Solyc11g068830.1.1
Uncharacterized protein (477 aa)
   
   
  0.606
Solyc00g050030.1.1
Annotation not available (702 aa)
         
  0.547
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
     
 
  0.543
Solyc01g090200.2.1
Uncharacterized protein (1061 aa)
   
        0.536
Solyc01g087500.2.1
DNA topoisomerase 2 ; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1478 aa)
   
   
  0.533
Solyc04g015450.2.1
Uncharacterized protein (681 aa)
   
   
  0.521
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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