• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc12g008440.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g008440.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g008440.1.1annotation not available (103 aa)    
Predicted Functional Partners:
Solyc08g080040.2.1
Uncharacterized protein; Leucoanthocyanidin dioxygenase; Belongs to the iron/ascorbate-dependent oxidoreductase family (418 aa)
           
  0.681
101246440
annotation not available (857 aa)
           
  0.489
Wfi1
Uncharacterized protein; Whitefly-induced gp91-phox (938 aa)
           
  0.489
101251928
Uncharacterized protein; Respiratory burst oxidase homolog B (865 aa)
           
  0.489
101253241
annotation not available (334 aa)
           
  0.449
101256794
annotation not available (392 aa)
           
  0.449
101254104
annotation not available (290 aa)
           
  0.449
Solyc06g007230.1.1
Uncharacterized protein; TOXICOS EN LEVADURA 63 (173 aa)
           
  0.449
101265719
annotation not available (398 aa)
           
  0.449
101244425
RING/U-box superfamily protein (276 aa)
           
  0.449
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (10%) [HD]