STRINGSTRING
Solyc12g008470.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g008470.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g008470.1.1Uncharacterized protein (84 aa)    
Predicted Functional Partners:
Solyc10g081440.1.1
NADH-cytochrome b5 reductase (278 aa)
     
  0.750
Solyc05g018520.2.1
NADH-cytochrome b5 reductase (323 aa)
     
  0.750
NIA
Nitrate reductase [NADH] ; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (912 aa)
     
0.651
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
     
 
  0.529
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
     
   
  0.524
Solyc03g063560.2.1
Uncharacterized protein (1621 aa)
     
   
  0.491
Solyc03g116730.2.1
Uncharacterized protein (387 aa)
     
 
  0.488
Solyc11g042420.1.1
Uncharacterized protein ; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (112 aa)
     
 
  0.487
Solyc01g103220.2.1
Cytochrome c ; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (112 aa)
     
 
  0.487
Solyc01g103680.2.1
Uncharacterized protein (500 aa)
       
      0.487
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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