STRINGSTRING
Solyc12g008700.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g008700.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g008700.1.1Uncharacterized protein (62 aa)    
Predicted Functional Partners:
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
     
  0.999
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
     
  0.999
Solyc11g020890.1.1
Uncharacterized protein (56 aa)
     
  0.998
Solyc06g073430.2.1
Uncharacterized protein (56 aa)
     
  0.998
Solyc06g072120.2.1
40S ribosomal protein SA ; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (296 aa)
     
  0.998
Solyc03g019780.2.1
40S ribosomal protein SA ; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits (298 aa)
     
  0.998
Solyc11g022620.1.1
Uncharacterized protein (78 aa)
     
  0.998
Solyc11g022610.1.1
Uncharacterized protein (109 aa)
     
  0.998
Solyc09g015330.1.1
Uncharacterized protein (176 aa)
     
  0.998
Solyc09g015310.1.1
Uncharacterized protein (117 aa)
     
  0.998
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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