STRINGSTRING
Solyc12g008850.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g008850.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g008850.1.1Uncharacterized protein (672 aa)    
Predicted Functional Partners:
cuAO
Amine oxidase (721 aa)
         
  0.923
Solyc08g014330.2.1
Amine oxidase (788 aa)
         
  0.923
Solyc06g071700.1.1
Amine oxidase (774 aa)
         
  0.923
Solyc05g013440.2.1
Amine oxidase (776 aa)
         
  0.923
Solyc03g005160.2.1
Amine oxidase (658 aa)
         
  0.923
Solyc01g087590.2.1
Uncharacterized protein (497 aa)
         
0.913
Solyc02g081390.2.1
Uncharacterized protein (495 aa)
         
0.912
Solyc03g031880.2.1
Uncharacterized protein (478 aa)
         
0.912
Solyc07g043590.2.1
Uncharacterized protein (490 aa)
         
0.912
Solyc12g006370.1.1
Uncharacterized protein (488 aa)
         
0.911
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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