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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc12g008920.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g008920.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g008920.1.1annotation not available (456 aa)    
Predicted Functional Partners:
Solyc11g063710.1.1
annotation not available (204 aa)
           
  0.797
Solyc11g063690.1.1
annotation not available (159 aa)
           
  0.797
Solyc11g061900.1.1
annotation not available (197 aa)
           
  0.797
Solyc11g061870.1.1
annotation not available (204 aa)
           
  0.797
Solyc11g061860.1.1
annotation not available (139 aa)
           
  0.797
Solyc11g019890.1.1
annotation not available (205 aa)
           
  0.797
Solyc11g019850.1.1
annotation not available (54 aa)
           
  0.797
Solyc08g061730.1.1
annotation not available (89 aa)
           
  0.797
Solyc08g061680.1.1
annotation not available (205 aa)
           
  0.797
Solyc07g037960.1.1
annotation not available (485 aa)
           
  0.736
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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