STRINGSTRING
Solyc12g009050.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g009050.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g009050.1.1Uncharacterized protein (253 aa)    
Predicted Functional Partners:
Solyc11g016920.1.1
Uncharacterized protein (138 aa)
     
  0.906
Solyc11g016910.1.1
Uncharacterized protein (93 aa)
     
  0.906
Solyc08g007960.1.1
Uncharacterized protein (124 aa)
     
  0.906
CIP2a
CONSTANS interacting protein 2a (232 aa)
     
  0.906
Solyc06g016750.2.1
Uncharacterized protein (446 aa)
     
  0.906
Solyc05g015330.1.1
Uncharacterized protein (144 aa)
     
  0.906
Solyc03g111470.1.1
Uncharacterized protein (273 aa)
     
  0.906
Solyc03g111460.1.1
Uncharacterized protein (288 aa)
     
  0.906
Solyc03g111450.1.1
Uncharacterized protein (318 aa)
     
  0.906
Solyc03g110860.2.1
Uncharacterized protein (230 aa)
     
  0.906
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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