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Solyc12g009260.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g009260.1.1" - 3-oxoacyl-[acyl-carrier-protein] synthase in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g009260.1.13-oxoacyl-[acyl-carrier-protein] synthase (443 aa)    
Predicted Functional Partners:
Solyc01g006980.2.1
Uncharacterized protein (359 aa)
 
  0.998
Solyc03g097470.2.1
Uncharacterized protein (431 aa)
 
 
  0.989
Solyc08g006560.2.1
Uncharacterized protein (381 aa)
 
 
  0.986
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
  0.985
Solyc10g078740.1.1
Uncharacterized protein (392 aa)
   
 
  0.967
Solyc01g006450.2.1
Uncharacterized protein (392 aa)
   
 
  0.967
Solyc05g014560.2.1
Uncharacterized protein (322 aa)
 
  0.964
Solyc06g071910.2.1
Uncharacterized protein (321 aa)
 
  0.964
Solyc08g008430.2.1
Uncharacterized protein (316 aa)
     
  0.954
Solyc06g071070.1.1
Uncharacterized protein (261 aa)
     
  0.954
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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