STRINGSTRING
Solyc12g009600.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g009600.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g009600.1.1Uncharacterized protein (210 aa)    
Predicted Functional Partners:
Solyc02g086910.2.1
Uncharacterized protein (451 aa)
     
   
  0.728
Solyc04g015490.2.1
Mg-protoporphyrin IX chelatase ; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (766 aa)
     
        0.728
Solyc12g056830.1.1
Uncharacterized protein (250 aa)
     
        0.639
Solyc03g082890.2.1
Uncharacterized protein (233 aa)
     
   
  0.616
Solyc07g042440.2.1
Uncharacterized protein (213 aa)
     
        0.590
Solyc06g065390.2.1
Uncharacterized protein (212 aa)
     
        0.565
Solyc10g081100.1.1
Uncharacterized protein (149 aa)
     
        0.513
SPA
Protein SPA; Participates in determining harvest index (HI) by affecting source-sink carbon distribution. Up-regulates the conversion of fixed carbon to exportable sugars (159 aa)
     
        0.508
Solyc01g098640.2.1
Uncharacterized protein (289 aa)
     
        0.505
Solyc06g065490.2.1
Uncharacterized protein (250 aa)
     
   
  0.501
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (19%) [HD]