STRINGSTRING
Solyc12g009820.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g009820.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g009820.1.1Uncharacterized protein (455 aa)    
Predicted Functional Partners:
Solyc10g017580.2.1
Uncharacterized protein (461 aa)
         
  0.951
Solyc01g094170.2.1
Uncharacterized protein (421 aa)
         
  0.951
Solyc10g081900.1.1
Uncharacterized protein (798 aa)
         
  0.949
Solyc01g007100.2.1
Uncharacterized protein (776 aa)
         
  0.949
Solyc10g085100.1.1
Uncharacterized protein (504 aa)
   
 
  0.940
Solyc09g014300.2.1
Uncharacterized protein (506 aa)
   
 
  0.927
Solyc10g079770.1.1
Uncharacterized protein (445 aa)
     
 
    0.903
Solyc10g079410.1.1
Uncharacterized protein (826 aa)
     
 
    0.903
Solyc07g006580.2.1
Diacylglycerol kinase (486 aa)
     
 
    0.902
Solyc06g009270.2.1
Diacylglycerol kinase (481 aa)
     
 
    0.902
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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