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STRINGSTRING
Solyc12g009950.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g009950.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g009950.1.1annotation not available (328 aa)    
Predicted Functional Partners:
Solyc02g084570.2.1
annotation not available (521 aa)
         
  0.681
101265606
annotation not available (547 aa)
     
 
  0.670
101251452
Uncharacterized protein; O-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family (357 aa)
         
  0.659
101256157
annotation not available (490 aa)
     
 
    0.651
Solyc12g055820.1.1
annotation not available (527 aa)
         
    0.650
Eli3
Uncharacterized protein; ELI3 (359 aa)
         
    0.650
101259903
annotation not available (356 aa)
         
    0.650
104644298
annotation not available (359 aa)
         
    0.650
101265396
annotation not available (359 aa)
         
    0.650
101253340
annotation not available (359 aa)
         
    0.650
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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