STRINGSTRING
Solyc12g010840.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g010840.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g010840.1.1Uncharacterized protein (591 aa)    
Predicted Functional Partners:
Solyc05g053540.2.1
Uncharacterized protein (611 aa)
 
  0.996
Solyc12g043020.1.1
Uncharacterized protein (615 aa)
 
  0.996
Solyc07g061940.2.1
Uncharacterized protein (516 aa)
 
 
  0.983
Solyc03g044330.1.1
Acetolactate synthase (659 aa)
 
 
  0.983
Solyc06g059880.2.1
Acetolactate synthase (650 aa)
 
 
  0.983
Solyc11g008780.1.1
Uncharacterized protein (490 aa)
 
  0.981
Solyc12g019310.1.1
Uncharacterized protein (415 aa)
 
  0.981
Solyc07g061950.2.1
Uncharacterized protein (717 aa)
         
    0.900
Solyc07g053280.2.1
Alpha-keto-beta-hydroxylacyl reductoisomerase (594 aa)
   
   
 
0.801
Solyc12g019300.1.1
Uncharacterized protein (110 aa)
   
  0.784
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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