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STRINGSTRING
101267384 protein (Solanum lycopersicum) - STRING interaction network
"101267384" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101267384annotation not available (339 aa)    
Predicted Functional Partners:
101256148
ROP-interactive CRIB motif-containing protein 4 (170 aa)
           
  0.739
Solyc09g009950.2.1
Uncharacterized protein; Pentatricopeptide repeat (PPR) superfamily protein (613 aa)
       
      0.713
101246944
Uncharacterized protein; FUNCTIONS IN- molecular_function unknown; INVOLVED IN- protein transport, Golgi organization; LOCATED IN- vacuole; EXPRESSED IN- 23 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- COG complex component, COG2 (InterP /.../009316); Has 30201 Blast hits to 17322 proteins in 780 species- Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source- NCBI BLink) (742 aa)
       
      0.713
Solyc11g008340.1.1
Uncharacterized protein; Subunit of exocyst complex 8 (1143 aa)
           
  0.674
101261809
Uncharacterized protein; SEC6 (749 aa)
           
  0.670
101264457
Zinc finger (Ran-binding) family protein (874 aa)
       
      0.635
101266009
Uncharacterized protein; Exocyst complex component 84B (772 aa)
           
  0.621
101263759
Rho GTPase activating protein with PAK-box/P21-Rho-binding domain (495 aa)
     
   
  0.572
ERabp1
ER auxin binding protein 1 (202 aa)
           
  0.561
Solyc10g019030.1.1
annotation not available (244 aa)
     
 
  0.490
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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