STRINGSTRING
Solyc12g013630.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g013630.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g013630.1.1Uncharacterized protein (628 aa)    
Predicted Functional Partners:
Solyc09g042300.1.1
Uncharacterized protein (86 aa)
   
  0.875
Solyc09g042280.1.1
Uncharacterized protein (111 aa)
   
  0.875
Solyc09g091660.2.1
Uncharacterized protein (1440 aa)
   
0.856
Solyc08g067620.2.1
Uncharacterized protein (1453 aa)
   
0.856
Solyc05g051540.1.1
Uncharacterized protein (130 aa)
   
  0.827
Solyc03g113070.2.1
Uncharacterized protein (576 aa)
   
  0.827
Solyc11g007000.1.1
Uncharacterized protein (475 aa)
       
    0.763
Solyc10g049480.1.1
Uncharacterized protein (461 aa)
   
  0.738
Solyc12g057010.1.1
Uncharacterized protein (520 aa)
   
 
  0.734
Solyc12g017380.1.1
Uncharacterized protein (445 aa)
   
 
  0.734
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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