STRINGSTRING
Solyc12g013640.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g013640.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g013640.1.1Uncharacterized protein (630 aa)    
Predicted Functional Partners:
Solyc09g042300.1.1
Uncharacterized protein (86 aa)
   
  0.842
Solyc09g042280.1.1
Uncharacterized protein (111 aa)
   
  0.842
Solyc00g283010.1.1
Annotation not available (645 aa)
       
 
  0.747
Solyc12g019640.1.1
Uncharacterized protein (608 aa)
 
0.689
Solyc12g019620.1.1
Uncharacterized protein (837 aa)
   
0.663
Solyc05g051530.2.1
Uncharacterized protein (530 aa)
0.657
Solyc01g105450.2.1
Uncharacterized protein (627 aa)
 
0.651
Solyc03g113080.2.1
Uncharacterized protein (358 aa)
           
  0.634
Solyc03g113070.2.1
Uncharacterized protein (576 aa)
           
  0.634
Solyc12g044580.1.1
Uncharacterized protein (160 aa)
   
  0.613
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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