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STRINGSTRING
Solyc12g013860.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g013860.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g013860.1.1annotation not available (332 aa)    
Predicted Functional Partners:
101249146
Uncharacterized protein; Molecular chaperone; assists the folding of proteins upon ATP hydrolysis (526 aa)
           
  0.684
101250630
Rubber elongation factor protein (REF) (287 aa)
           
  0.648
101253428
Rubber elongation factor protein (REF) (227 aa)
           
  0.648
101245758
Uncharacterized protein; Basic region/leucine zipper motif 60 (284 aa)
           
  0.608
101262286
annotation not available (1018 aa)
           
  0.585
LESK1
Uncharacterized protein (956 aa)
           
  0.585
Solyc02g071800.2.1
annotation not available (908 aa)
           
  0.585
101268063
Glutaredoxin family protein (143 aa)
           
  0.572
Solyc07g032640.1.1
annotation not available (127 aa)
           
  0.556
Solyc07g032620.1.1
annotation not available (112 aa)
           
  0.556
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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