STRINGSTRING
HGO protein (Solanum lycopersicum) - STRING interaction network
"HGO" - Homogentisate 1,2-dioxygenase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HGOHomogentisate 1,2-dioxygenase (463 aa)    
Predicted Functional Partners:
Solyc07g045050.2.1
4-hydroxyphenylpyruvate dioxygenase (441 aa)
 
 
  0.987
Solyc05g041200.2.1
4-hydroxyphenylpyruvate dioxygenase (441 aa)
   
 
  0.985
Solyc01g102660.2.1
Uncharacterized protein (222 aa)
 
 
  0.970
Solyc01g091330.2.1
Uncharacterized protein (284 aa)
 
 
  0.968
Solyc11g012160.1.1
Uncharacterized protein (420 aa)
 
   
  0.846
Solyc04g014730.2.1
Uncharacterized protein (483 aa)
 
   
  0.845
GS1
Glutamine synthetase (354 aa)
           
  0.700
Solyc01g066480.2.1
Uncharacterized protein (259 aa)
   
   
  0.566
Solyc12g094430.1.1
Uncharacterized protein (221 aa)
   
 
  0.534
Solyc12g056250.1.1
Uncharacterized protein (236 aa)
   
 
  0.534
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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