STRINGSTRING
Solyc12g015710.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc12g015710.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc12g015710.1.1Uncharacterized protein (564 aa)    
Predicted Functional Partners:
Solyc01g109990.2.1
Uncharacterized protein (1012 aa)
     
 
  0.997
Solyc09g090740.2.1
Uncharacterized protein (799 aa)
     
 
  0.996
Solyc07g047670.2.1
Pescadillo homolog ; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (603 aa)
     
 
  0.996
Solyc10g083600.1.1
Uncharacterized protein (337 aa)
     
 
  0.996
Solyc11g020820.1.1
2’-O-ribose RNA methyltransferase SPB1 homolog ; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (817 aa)
   
 
  0.996
Solyc11g020810.1.1
2’-O-ribose RNA methyltransferase SPB1 homolog ; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits (829 aa)
   
 
  0.996
Solyc10g046930.1.1
Uncharacterized protein (766 aa)
   
 
  0.996
Solyc01g103740.2.1
Uncharacterized protein (504 aa)
     
 
  0.996
Solyc01g103720.2.1
Uncharacterized protein (99 aa)
     
 
  0.996
Solyc09g061430.2.1
Putative nuclear GTPase (609 aa)
     
 
  0.996
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (12%) [HD]